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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G44060.1
PEP
AT2G44060.1
Position on the Genome Chromosome Chr2
Start Position 18226922
End Position 18227988
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00204606
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Late embryogenesis abundant protein, LEA_2 subgroup
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Similar to late embryogenesis abundant proteins
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03168
Pfam Description Details
InterPro ID
IPR004864,IPR013990
InterPro Description Details
GO ID
GO:0009269
GO Description Details
GOslim ID
GO:0050896
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Similar to late embryogenesis abundant proteins
OrthoDB(1 item)
136631at33090
Late embryogenesis abundant protein, LEA_2 subgroup
Pfam(1 item)
 
Late embryogenesis abundant protein
InterPro(2 items)
 
Late embryogenesis abundant protein, LEA_2 subgroup
Gene ontology(1 item)
BP
response to desiccation
GO slim(1 item)
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.