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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G43050.1
PEP
AT2G43050.1
Position on the Genome Chromosome Chr2
Start Position 17902508
End Position 17904174
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00658266
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Pectinesterase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable pectinesterase/pectinesterase inhibitor 16
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF04043,PF01095
Pfam Description Details
InterPro ID
IPR000070,IPR006501,IPR011050,IPR035513,IPR033131,IPR012334
InterPro Description Details
GO ID
GO:0030599,GO:0042545,GO:0005576,GO:0046910,GO:0005618,GO:0045330,GO:0045490
GO Description Details
GOslim ID
GO:0071555,GO:0005976,GO:0005618,GO:0016787,GO:0009057,GO:0030234,GO:0005576
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Probable pectinesterase/pectinesterase inhibitor 16
OrthoDB(1 item)
64411at33090
Pectinesterase
Pfam(2 items)
 
Plant invertase/pectin methylesterase inhibitor
 
Pectinesterase
InterPro(6 items)
 
Pectinesterase, catalytic
 
Pectinesterase inhibitor domain
 
Pectin_lyase_fold/virulence
 
Invertase/methylesterase_inhib
 
Pectinesterase_Asp_AS
 
Pectin_lyas_fold
Gene ontology(7 items)
MF
pectinesterase activity
BP
cell wall modification
CC
extracellular region
MF
pectinesterase inhibitor activity
MF
aspartyl esterase activity
BP
pectin catabolic process
GO slim(7 items)
BP
cell wall organization
BP
polysaccharide metabolic process
MF
hydrolase activity
BP
macromolecule catabolic process
MF
enzyme regulator activity
CC
extracellular region

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.