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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G37690.1
PEP
AT2G37690.1
Position on the Genome Chromosome Chr2
Start Position 15806111
End Position 15810240
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00127034
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
ATP-grasp fold
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
AIR carboxylase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF02222,PF00731,PF17769
Pfam Description Details
InterPro ID
IPR000031,IPR013815,IPR035893,IPR040686,IPR005875,IPR003135,IPR011054,IPR016301,IPR016185
InterPro Description Details
GO ID
GO:0006189,GO:0043727,GO:0004638,GO:0005524
GO Description Details
GOslim ID
GO:0016829,GO:0043167,GO:0000166,GO:0009117
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G37690
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
AIR carboxylase
OrthoDB(1 item)
32906at33090
ATP-grasp fold
Pfam(3 items)
 
ATP-grasp domain
 
AIR carboxylase
 
PurK_C
InterPro(9 items)
 
ATP_grasp_subdomain_1
 
ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
 
Rudment_hybrid_motif
 
Ade2_fungi/plant
 
PreATP-grasp_dom_sf
Gene ontology(4 items)
BP
'de novo' IMP biosynthetic process
MF
5-amino-4-imidazole carboxylate lyase activity
MF
phosphoribosylaminoimidazole carboxylase activity
GO slim(4 items)
MF
lyase activity
MF
nucleotide binding
BP
nucleotide metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.