Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G37020.1
PEP
AT2G37020.1
Position on the Genome Chromosome Chr2
Start Position 15546514
End Position 15548792
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00201470
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Translin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Translin family protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01997
Pfam Description Details
InterPro ID
IPR002848,IPR036081,IPR016069,IPR033956,IPR016068
InterPro Description Details
GO ID
GO:0005737,GO:0005634,GO:0043565,GO:0003723,GO:0003697,GO:0004521
GO Description Details
GOslim ID
GO:0003676,GO:0016070,GO:0005634,GO:0016787,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Translin family protein
OrthoDB(1 item)
163670at33090
Translin
Pfam(1 item)
 
Translin family
InterPro(5 items)
 
Translin family
Gene ontology(6 items)
MF
sequence-specific DNA binding
MF
single-stranded DNA binding
MF
endoribonuclease activity
GO slim(5 items)
MF
nucleic acid binding
BP
RNA metabolic process
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.