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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G35410.1
PEP
AT2G35410.1
Position on the Genome Chromosome Chr2
Start Position 14898341
End Position 14899590
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00667783
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
RNA-binding domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00076
Pfam Description Details
InterPro ID
IPR000504,IPR035979,IPR012677
InterPro Description Details
GO ID
GO:0003723
GO Description Details
GOslim ID
GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
197716at33090
RNA-binding domain superfamily
Pfam(1 item)
 
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
InterPro(3 items)
 
RNA recognition motif domain
 
RBD_domain_sf
 
Nucleotide-bd_a/b_plait_sf
Gene ontology(1 item)
GO slim(1 item)
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.