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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G27370.1
PEP
AT2G27370.1
Position on the Genome Chromosome Chr2
Start Position 11708628
End Position 11709905
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00420330
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Casparian strip membrane protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Casparian strip membrane protein 3
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF04535
Pfam Description Details
InterPro ID
IPR006702,IPR006459
InterPro Description Details
GO ID
GO:0048226,GO:0005886,GO:1902004,GO:0016021,GO:0051539,GO:0006508,GO:0007043,GO:0042803,GO:0031647,GO:0042545
GO Description Details
GOslim ID
GO:0050789,GO:0071555,GO:0005515,GO:0022607,GO:0016020,GO:0019538,GO:0031647,GO:0006518,GO:0006508,GO:0051540,GO:0005618
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.