Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G27020.1
PEP
AT2G27020.1
Position on the Genome Chromosome Chr2
Start Position 11528515
End Position 11530858
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01251865
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Proteasome, subunit alpha/beta
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
20S proteasome alpha subunit G1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00227,PF10584
Pfam Description Details
InterPro ID
IPR000426,IPR001353,IPR023332,IPR035150,IPR029055
InterPro Description Details
GO ID
GO:0008233,GO:0019773,GO:0006511
GO Description Details
GOslim ID
GO:0009057,GO:0000502,GO:0006508,GO:0008233
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
20S proteasome alpha subunit G1
OrthoDB(1 item)
149359at33090
Proteasome, subunit alpha/beta
Pfam(2 items)
 
Proteasome subunit
 
Proteasome subunit A N-terminal signature
InterPro(5 items)
 
Proteasome alpha-subunit, N-terminal domain
 
Proteasome, subunit alpha/beta
 
Proteasome_alpha-type
 
Proteasome_alpha3_plant
 
Ntn_hydrolases_N
Gene ontology(3 items)
MF
peptidase activity
CC
proteasome core complex, alpha-subunit complex
BP
ubiquitin-dependent protein catabolic process
GO slim(4 items)
BP
macromolecule catabolic process
CC
proteasome complex
MF
peptidase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.