Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G78440.1
PEP
AT1G78440.1
Position on the Genome Chromosome Chr1
Start Position 29511772
End Position 29512990
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00433225
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Oxoglutarate/iron-dependent dioxygenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Gibberellin 2-beta-dioxygenase 1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF03171,PF14226
Pfam Description Details
InterPro ID
IPR005123,IPR026992,IPR027443
InterPro Description Details
GO ID
GO:0009416,GO:0051213,GO:0045487,GO:0009686,GO:0052634,GO:0046872
GO Description Details
GOslim ID
GO:0051213,GO:0050896,GO:0044255,GO:0043167,GO:0006082
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G78440
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.