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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G73060.1
PEP
AT1G73060.1
Position on the Genome Chromosome Chr1
Start Position 27479027
End Position 27481258
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00688168
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Domain of unknown function DUF1995
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein LOW PSII ACCUMULATION 3, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF09353
Pfam Description Details
InterPro ID
IPR018962
InterPro Description Details
GO ID
GO:0009570,GO:0005739,GO:0009535,GO:0009507
GO Description Details
GOslim ID
GO:0009579,GO:0009536,GO:0016020,GO:0005739
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein LOW PSII ACCUMULATION 3, chloroplastic
OrthoDB(1 item)
109823at33090
Domain of unknown function DUF1995
Pfam(1 item)
 
Domain of unknown function (DUF1995)
InterPro(1 item)
 
Domain of unknown function DUF1995
Gene ontology(4 items)
CC
chloroplast stroma
CC
mitochondrion
CC
chloroplast thylakoid membrane
GO slim(4 items)
CC
mitochondrion

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.