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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G62360.1
PEP
AT1G62360.1
Position on the Genome Chromosome Chr1
Start Position 23058796
End Position 23061722
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00402467
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Homeobox domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Homeobox protein SHOOT MERISTEMLESS
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03790,PF05920,PF03791,PF03789
Pfam Description Details
InterPro ID
IPR008422,IPR005540,IPR009057,IPR001356,IPR005541,IPR005539,IPR017970
InterPro Description Details
GO ID
GO:0009934,GO:0003723,GO:0000981,GO:0048440,GO:0006357,GO:0010582,GO:0000790,GO:0009506,GO:0009691,GO:0003700,GO:0010497,GO:0005634,GO:0005737,GO:0019827,GO:0042803,GO:0000978,GO:0015630,GO:0005886,GO:0005768
GO Description Details
GOslim ID
GO:0005768,GO:0046483,GO:0005634,GO:0032502,GO:0005694,GO:0003676,GO:0005856,GO:0000003,GO:0016020,GO:0032501,GO:0050789,GO:0009308,GO:0005515,GO:0042445,GO:0006351,GO:0006810,GO:0065009,GO:0005737,GO:0006725,GO:0055044
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
TALE family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.