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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G56050.1
PEP
AT1G56050.1
Position on the Genome Chromosome Chr1
Start Position 20963793
End Position 20966181
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00407376
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Obg-like ATPase 1
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Obg-like ATPase 1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF06071,PF01926
Pfam Description Details
InterPro ID
IPR004396,IPR004095,IPR027417,IPR023192,IPR012676,IPR013029,IPR031167,IPR006073,IPR012675,IPR041706
InterPro Description Details
GO ID
GO:0016887,GO:0009507,GO:0005737,GO:0043023,GO:0043022,GO:0005525,GO:0005524,GO:0009570,GO:0005634
GO Description Details
GOslim ID
GO:0009536,GO:0043021,GO:0016787,GO:0000166,GO:0001882,GO:0043167,GO:0005634,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G56050
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Obg-like ATPase 1
OrthoDB(1 item)
86317at33090
Obg-like ATPase 1
Pfam(2 items)
 
Protein of unknown function (DUF933)
 
50S ribosome-binding GTPase
InterPro(10 items)
 
ATPase_YchF/OLA1
 
P-loop_NTPase
 
TGS-like_dom_sf
 
YchF, C-terminal domain
 
GTP binding domain
 
Beta-grasp_dom_sf
Gene ontology(9 items)
MF
ATPase activity
MF
ribosomal large subunit binding
MF
ribosome binding
CC
chloroplast stroma
GO slim(8 items)
MF
ribonucleoprotein complex binding
MF
hydrolase activity
MF
nucleotide binding
MF
nucleoside binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.