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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G55620.1
PEP
AT1G55620.1
Position on the Genome Chromosome Chr1
Start Position 20787338
End Position 20790313
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00586073
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Chloride channel protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Chloride channel protein CLC-f
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00571,PF00654
Pfam Description Details
InterPro ID
IPR000644,IPR014743,IPR001807
InterPro Description Details
GO ID
GO:0005794,GO:0005247,GO:0034765,GO:0034707,GO:0009507
GO Description Details
GOslim ID
GO:0006811,GO:0005794,GO:0032991,GO:0050789,GO:0016020,GO:0009536,GO:0005215
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Chloride channel protein CLC-f
OrthoDB(1 item)
47959at33090
Chloride channel protein
Pfam(2 items)
 
CBS domain
 
Voltage gated chloride channel
InterPro(3 items)
 
Cl-channel_core
 
Chloride channel, voltage gated
Gene ontology(5 items)
CC
Golgi apparatus
MF
voltage-gated chloride channel activity
BP
regulation of ion transmembrane transport
CC
chloride channel complex
GO slim(7 items)
BP
ion transport
CC
Golgi apparatus
CC
protein-containing complex
BP
regulation of biological process
MF
transporter activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.