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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G55050.1
PEP
AT1G55050.1
Position on the Genome Chromosome Chr1
Start Position 20542779
End Position 20545612
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00066262
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Homeobox-like domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR009057
InterPro Description Details
GO ID
GO:0005634,GO:0003714,GO:0001085
GO Description Details
GOslim ID
GO:0005515,GO:0065009,GO:0009059,GO:0005634,GO:0050789,GO:0016070
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
70143at33090
Homeobox-like domain superfamily
InterPro(1 item)
 
Homeobox-like_sf
Gene ontology(3 items)
MF
transcription corepressor activity
MF
RNA polymerase II transcription factor binding
GO slim(6 items)
MF
protein binding
BP
regulation of molecular function
BP
macromolecule biosynthetic process
BP
regulation of biological process
BP
RNA metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.