Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G51150.1
PEP
AT1G51150.1
Position on the Genome Chromosome Chr1
Start Position 18948370
End Position 18949290
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00585355
KusakiDB version 2
Evidence is present No
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
PDZ domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Putative protease Do-like 6, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR009003
InterPro Description Details
GO ID
GO:0004252,GO:0009507,GO:0006508
GO Description Details
GOslim ID
GO:0008233,GO:0009536,GO:0006508
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Putative protease Do-like 6, chloroplastic
OrthoDB(1 item)
594175at2759
PDZ domain
InterPro(1 item)
 
Peptidase_S1_PA
Gene ontology(3 items)
MF
serine-type endopeptidase activity
GO slim(3 items)
MF
peptidase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.