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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G17920.1
PEP
AT1G17920.1
Position on the Genome Chromosome Chr1
Start Position 6162214
End Position 6165033
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00388672
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Homeobox domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Homeobox-leucine zipper protein HDG12
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00046,PF01852
Pfam Description Details
InterPro ID
IPR001356,IPR023393,IPR042160,IPR002913,IPR009057,IPR017970
InterPro Description Details
GO ID
GO:0048497,GO:0005634,GO:0003700,GO:0010091,GO:0008289,GO:0003677,GO:0000981
GO Description Details
GOslim ID
GO:0032501,GO:0006351,GO:0003676,GO:0050789,GO:0032502,GO:0005634,GO:0005694,GO:0000003,GO:0065009,GO:0008289
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
HD-ZIP family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G17920
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.