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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G17200.1
PEP
AT1G17200.1
Position on the Genome Chromosome Chr1
Start Position 5878493
End Position 5879871
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00639639
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
CASP-like protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
CASP-like protein 2A1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF04535
Pfam Description Details
InterPro ID
IPR006459,IPR006702
InterPro Description Details
GO ID
GO:0051539,GO:0005886,GO:0016021,GO:0080167
GO Description Details
GOslim ID
GO:0050896,GO:0016020,GO:0051540
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.