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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G12460.1
PEP
AT1G12460.1
Position on the Genome Chromosome Chr1
Start Position 4247703
End Position 4250444
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00332203
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Leucine-rich repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Protein kinase domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF07714,PF08263
Pfam Description Details
InterPro ID
IPR032675,IPR011009,IPR003591,IPR013210,IPR001245,IPR000719
InterPro Description Details
GO ID
GO:0016021,GO:0004672,GO:0005524
GO Description Details
GOslim ID
GO:0016020,GO:0043167,GO:0016740,GO:0000166,GO:0006464,GO:0006793
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein kinase domain-containing protein
OrthoDB(1 item)
34733at33090
Leucine-rich repeat
Pfam(2 items)
 
Protein tyrosine kinase
 
Leucine rich repeat N-terminal domain
InterPro(6 items)
 
Kinase-like_dom_sf
 
Leu-rich_rpt_typical-subtyp
 
Leucine-rich repeat-containing N-terminal, plant-type
 
Serine-threonine/tyrosine-protein kinase, catalytic domain
 
Protein kinase domain
Gene ontology(3 items)
CC
integral component of membrane
MF
protein kinase activity
GO slim(6 items)
MF
transferase activity
MF
nucleotide binding
BP
cellular protein modification process
BP
phosphorus metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.