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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G09830.1
PEP
AT1G09830.1
Position on the Genome Chromosome Chr1
Start Position 3192783
End Position 3194936
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01777885
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Phosphoribosylglycinamide synthetase, C-domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Phosphoribosylamine--glycine ligase, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01071,PF02844,PF02843
Pfam Description Details
InterPro ID
IPR011761,IPR000115,IPR013815,IPR020560,IPR011054,IPR016185,IPR020559,IPR020562,IPR020561,IPR037123
InterPro Description Details
GO ID
GO:0006189,GO:0009113,GO:0009507,GO:0004637,GO:0046872,GO:0005524,GO:0009570
GO Description Details
GOslim ID
GO:0009117,GO:0009536,GO:0006139,GO:0042440,GO:0000166,GO:0043167,GO:0016874
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G09830
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Phosphoribosylamine--glycine ligase, chloroplastic
OrthoDB(1 item)
65196at33090
Phosphoribosylglycinamide synthetase, C-domain
Pfam(3 items)
 
Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
 
Phosphoribosylglycinamide synthetase, N domain
 
Phosphoribosylglycinamide synthetase, C domain
InterPro(10 items)
 
PRibGlycinamide_synth
 
ATP_grasp_subdomain_1
 
Phosphoribosylglycinamide synthetase, C-domain
 
Rudment_hybrid_motif
 
PreATP-grasp_dom_sf
 
PRibGlycinamide_synth_CS
 
Phosphoribosylglycinamide synthetase, N-terminal
 
Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
 
PRibGlycinamide_synth_C_sf
Gene ontology(7 items)
BP
'de novo' IMP biosynthetic process
BP
purine nucleobase biosynthetic process
MF
phosphoribosylamine-glycine ligase activity
MF
metal ion binding
CC
chloroplast stroma
GO slim(7 items)
BP
nucleotide metabolic process
BP
nucleobase-containing compound metabolic process
BP
pigment metabolic process
MF
nucleotide binding
MF
ligase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.