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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G08490.1
PEP
AT1G08490.1
Position on the Genome Chromosome Chr1
Start Position 2685980
End Position 2688547
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00580446
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Pyridoxal phosphate-dependent transferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Cysteine desulfurase 1, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00266
Pfam Description Details
InterPro ID
IPR015424,IPR010970,IPR000192,IPR015422,IPR015421
InterPro Description Details
GO ID
GO:0006790,GO:0009000,GO:0009570,GO:0009507,GO:0031071,GO:0018283,GO:0001887,GO:0010269,GO:0006534,GO:0030170
GO Description Details
GOslim ID
GO:0006790,GO:0022607,GO:0050896,GO:0016740,GO:0006520,GO:0009536,GO:0006464,GO:0043167,GO:0008152,GO:0016829,GO:0019842
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G08490
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Cysteine desulfurase 1, chloroplastic
OrthoDB(1 item)
90301at33090
Pyridoxal phosphate-dependent transferase
Pfam(1 item)
 
Aminotransferase class-V
InterPro(5 items)
 
PyrdxlP-dep_Trfase
 
Cys_dSase_SufS
 
Aminotransferase class V domain
 
PyrdxlP-dep_Trfase_dom1
 
PyrdxlP-dep_Trfase_major
Gene ontology(10 items)
BP
sulfur compound metabolic process
MF
selenocysteine lyase activity
CC
chloroplast stroma
MF
cysteine desulfurase activity
BP
iron incorporation into metallo-sulfur cluster
BP
selenium compound metabolic process
BP
response to selenium ion
BP
cysteine metabolic process
MF
pyridoxal phosphate binding
GO slim(11 items)
BP
sulfur compound metabolic process
BP
cellular component assembly
BP
response to stimulus
MF
transferase activity
BP
cellular amino acid metabolic process
BP
cellular protein modification process
BP
metabolic process
MF
lyase activity
MF
vitamin binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.