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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G06180.1
PEP
AT1G06180.1
Position on the Genome Chromosome Chr1
Start Position 1889510
End Position 1891089
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00557053
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SANT/Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor MYB13
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00249
Pfam Description Details
InterPro ID
IPR009057,IPR017930,IPR001005
InterPro Description Details
GO ID
GO:0003677,GO:0007275,GO:0009909,GO:0003700,GO:0005634
GO Description Details
GOslim ID
GO:0050789,GO:0003676,GO:0032502,GO:0006351,GO:0000003,GO:0032501,GO:0065009,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
MYB family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G06180
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor MYB13
OrthoDB(1 item)
188672at33090
SANT/Myb domain
Pfam(1 item)
 
Myb-like DNA-binding domain
InterPro(3 items)
 
Homeobox-like_sf
 
SANT/Myb domain
Gene ontology(5 items)
BP
multicellular organism development
BP
regulation of flower development
MF
DNA-binding transcription factor activity
GO slim(8 items)
BP
regulation of biological process
MF
nucleic acid binding
BP
developmental process
BP
transcription, DNA-templated
BP
multicellular organismal process
BP
regulation of molecular function

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.