Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G02640.1
PEP
AT1G02640.1
Position on the Genome Chromosome Chr1
Start Position 564293
End Position 567580
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00192207
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glycoside hydrolase family 3 C-terminal domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable beta-D-xylosidase 2
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF14310,PF00933,PF01915
Pfam Description Details
InterPro ID
IPR001764,IPR026891,IPR036881,IPR002772,IPR013783,IPR036962,IPR017853
InterPro Description Details
GO ID
GO:0004553,GO:0031222,GO:0009044,GO:0045493,GO:0046556,GO:0005576,GO:0009505
GO Description Details
GOslim ID
GO:0016787,GO:0005576,GO:0009057,GO:0005618,GO:0005976
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.