Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G02310.1
PEP
AT1G02310.1
Position on the Genome Chromosome Chr1
Start Position 458243
End Position 460652
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00581466
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glycoside hydrolase, family 5
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Mannan endo-1,4-beta-mannosidase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00150
Pfam Description Details
InterPro ID
IPR017853,IPR001547
InterPro Description Details
GO ID
GO:0005975,GO:0005576,GO:0016985
GO Description Details
GOslim ID
GO:0016787,GO:0005975,GO:0005576
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.