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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G67300.1
PEP
AT5G67300.1
Position on the Genome Chromosome Chr5
Start Position 26854109
End Position 26855026
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00664261
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SANT/Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor MYB44
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00249
Pfam Description Details
InterPro ID
IPR009057,IPR017930,IPR001005
InterPro Description Details
GO ID
GO:0009414,GO:0006355,GO:0005634,GO:0042802,GO:1900150,GO:0003700,GO:0043565,GO:0009751,GO:0000978,GO:0010929,GO:2000031,GO:0050832,GO:0009738,GO:0042742,GO:0009737,GO:0000981,GO:0009753,GO:0000976,GO:0009651,GO:0010200,GO:2000022
GO Description Details
GOslim ID
GO:0065009,GO:0050896,GO:0050789,GO:0005634,GO:0005694,GO:0006351,GO:0007154,GO:0003676,GO:0044419,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
MYB family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G67300
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor MYB44
OrthoDB(1 item)
183265at33090
SANT/Myb domain
Pfam(1 item)
 
Myb-like DNA-binding domain
InterPro(3 items)
 
Homeobox-like_sf
 
SANT/Myb domain
Gene ontology(21 items)
BP
response to water deprivation
BP
regulation of transcription, DNA-templated
MF
identical protein binding
BP
regulation of defense response to fungus
MF
DNA-binding transcription factor activity
MF
sequence-specific DNA binding
BP
response to salicylic acid
MF
RNA polymerase II cis-regulatory region sequence-specific DNA binding
BP
positive regulation of auxin mediated signaling pathway
BP
regulation of salicylic acid mediated signaling pathway
BP
defense response to fungus
BP
abscisic acid-activated signaling pathway
BP
defense response to bacterium
BP
response to abscisic acid
MF
DNA-binding transcription factor activity, RNA polymerase II-specific
BP
response to jasmonic acid
MF
transcription regulatory region sequence-specific DNA binding
BP
response to salt stress
BP
response to chitin
BP
regulation of jasmonic acid mediated signaling pathway
GO slim(10 items)
BP
regulation of molecular function
BP
response to stimulus
BP
regulation of biological process
BP
transcription, DNA-templated
BP
cell communication
MF
nucleic acid binding
BP
interspecies interaction between organisms
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.