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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G66360.2
PEP
AT5G66360.2
Position on the Genome Chromosome Chr5
Start Position 26510329
End Position 26511711
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00410546
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
rRNA adenine N(6)-methyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Ribosomal RNA small subunit methyltransferase, mitochondrial
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00398
Pfam Description Details
InterPro ID
IPR020596,IPR001737,IPR020598,IPR011530,IPR029063
InterPro Description Details
GO ID
GO:0000179,GO:0003723,GO:0005739,GO:0046085,GO:0031167
GO Description Details
GOslim ID
GO:0005739,GO:0003676,GO:0042254,GO:0006396,GO:0043412,GO:0016740,GO:0009116
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G66360
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Ribosomal RNA small subunit methyltransferase, mitochondrial
OrthoDB(1 item)
151888at33090
rRNA adenine N(6)-methyltransferase
Pfam(1 item)
 
Ribosomal RNA adenine dimethylase
InterPro(5 items)
 
rRNA_Ade_Mease_Trfase_CS
 
Ribosomal RNA adenine methyltransferase KsgA/Erm
 
rRNA_Ade_methylase_Trfase_N
 
rRNA_adenine_dimethylase
 
SAM-dependent_MTases
Gene ontology(5 items)
MF
rRNA (adenine-N6,N6-)-dimethyltransferase activity
CC
mitochondrion
BP
adenosine metabolic process
BP
rRNA methylation
GO slim(7 items)
CC
mitochondrion
MF
nucleic acid binding
BP
ribosome biogenesis
BP
RNA processing
BP
macromolecule modification
MF
transferase activity
BP
nucleoside metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.