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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G62070.1
PEP
AT5G62070.1
Position on the Genome Chromosome Chr5
Start Position 24930057
End Position 24932451
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00351336
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
IQ motif, EF-hand binding site
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
IQD23
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF13178,PF00612
Pfam Description Details
InterPro ID
IPR027417,IPR000048,IPR025064
InterPro Description Details
GO ID
GO:0005516
GO Description Details
GOslim ID
GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
167665at33090
IQ motif, EF-hand binding site
Pfam(2 items)
 
Protein of unknown function (DUF4005)
 
IQ calmodulin-binding motif
InterPro(3 items)
 
P-loop_NTPase
 
IQ motif, EF-hand binding site
 
Domain of unknown function DUF4005
Gene ontology(1 item)
MF
calmodulin binding
GO slim(1 item)
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.