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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G60970.1
PEP
AT5G60970.1
Position on the Genome Chromosome Chr5
Start Position 24535570
End Position 24536652
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00678436
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription factor, TCP
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor TCP5
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03634
Pfam Description Details
InterPro ID
IPR005333,IPR017887
InterPro Description Details
GO ID
GO:0043565,GO:0045962,GO:0003700,GO:0005634,GO:0009408,GO:0006355,GO:0048366,GO:0009965,GO:0030154,GO:0010150
GO Description Details
GOslim ID
GO:0005634,GO:0032502,GO:0050896,GO:0003676,GO:0065009,GO:0050789,GO:0032501,GO:0006351
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
TCP family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor TCP5
OrthoDB(1 item)
168082at33090
Transcription factor, TCP
Pfam(1 item)
 
TCP family transcription factor
InterPro(2 items)
 
Transcription factor, TCP
Gene ontology(10 items)
MF
sequence-specific DNA binding
BP
positive regulation of development, heterochronic
MF
DNA-binding transcription factor activity
BP
response to heat
BP
regulation of transcription, DNA-templated
BP
leaf development
BP
leaf morphogenesis
BP
cell differentiation
BP
leaf senescence
GO slim(8 items)
BP
developmental process
BP
response to stimulus
MF
nucleic acid binding
BP
regulation of molecular function
BP
regulation of biological process
BP
multicellular organismal process
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.