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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G60690.1
PEP
AT5G60690.1
Position on the Genome Chromosome Chr5
Start Position 24397734
End Position 24401933
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI02212635
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Homeobox domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00046,PF08670,PF01852
Pfam Description Details
InterPro ID
IPR009057,IPR023393,IPR002913,IPR013978,IPR001356
InterPro Description Details
GO ID
GO:0005634,GO:0003677,GO:0008289
GO Description Details
GOslim ID
GO:0003676,GO:0008289,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
14276at33090
Homeobox domain
Pfam(3 items)
 
Homeobox domain
 
MEKHLA domain
 
START domain
InterPro(5 items)
 
Homeobox-like_sf
 
START-like_dom_sf
 
Homeobox domain
Gene ontology(3 items)
MF
lipid binding
GO slim(3 items)
MF
nucleic acid binding
MF
lipid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.