Arabidopsis thalianaAssembly Name:TAIR10
Gene File:Araport11_genes.201606.pep.fasta.gz
| Position on the Genome | Gene Name | CDS | AT5G60410.6 |
| PEP | AT5G60410.6 |
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| Position on the Genome | Chromosome | Chr5 | |
| Start Position | 24295226 | ||
| End Position | 24300671 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00141593 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, PHD-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | swissprot |
|
| Protein name | E3 SUMO-protein ligase SIZ1 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF02037,PF02891 |
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| Pfam Description | Details | ||
| InterPro ID | IPR031141,IPR036361,IPR011011,IPR019786,IPR003034,IPR001965,IPR004181,IPR013083 |
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| InterPro Description | Details | ||
| GO ID | GO:0051301,GO:0009414,GO:0050826,GO:0048589,GO:2000070,GO:0010113,GO:0009826,GO:0009910,GO:0010183,GO:0019789,GO:0010286,GO:0010337,GO:0048481,GO:0009787,GO:0016036,GO:0040008,GO:0008270,GO:0006952,GO:0016925,GO:0090352,GO:0010247,GO:0009553,GO:0016607,GO:0005634 |
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| GO Description | Details | ||
| GOslim ID | GO:0050789,GO:0005634,GO:0051704,GO:0002376,GO:0032502,GO:0006082,GO:0006807,GO:0006464,GO:0050896,GO:0006725,GO:0007154,GO:0032501,GO:0051301,GO:0000003,GO:0040011,GO:0043167,GO:0042180,GO:0016049,GO:0051606,GO:0040007,GO:0044419,GO:0019787 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Arabidopsis thaliana | |
| Family | Brassicaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
