Arabidopsis thalianaAssembly Name:TAIR10
Gene File:Araport11_genes.201606.pep.fasta.gz
| Position on the Genome | Gene Name | CDS | AT5G58410.1 |
| PEP | AT5G58410.1 |
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| Position on the Genome | Chromosome | Chr5 | |
| Start Position | 23609663 | ||
| End Position | 23617343 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00082528 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | E3 ubiquitin-protein ligase listerin |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF13639 |
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| Pfam Description | Details | ||
| InterPro ID | IPR011016,IPR039804,IPR039795,IPR016024,IPR001841,IPR013083 |
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| InterPro Description | Details | ||
| GO ID | GO:1990112,GO:0061630,GO:0043023,GO:0005829,GO:1990116,GO:0008270,GO:0072344 |
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| GO Description | Details | ||
| GOslim ID | GO:0043167,GO:0005737,GO:0032991,GO:0050789,GO:0006464,GO:0019787,GO:0043021,GO:0006508,GO:0009057 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Arabidopsis thaliana | |
| Family | Brassicaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
