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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G57360.2
PEP
AT5G57360.2
Position on the Genome Chromosome Chr5
Start Position 23241597
End Position 23244415
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01215275
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
PAS domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Galactose oxidase/kelch repeat superfamily protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF12937,PF13426,PF07646
Pfam Description Details
InterPro ID
IPR035965,IPR011498,IPR000014,IPR001810,IPR015915,IPR036047
InterPro Description Details
GO ID
GO:0019005,GO:0009908,GO:0005634,GO:0010114,GO:0042752,GO:0005829,GO:0010498,GO:0018298,GO:0016567,GO:0009882,GO:0031146,GO:0043153,GO:0007623
GO Description Details
GOslim ID
GO:0000003,GO:0032502,GO:0009057,GO:0050789,GO:0032501,GO:0050896,GO:0005634,GO:0000151,GO:0006464,GO:0006508,GO:0007154,GO:0038023,GO:0048511,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.