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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G57100.1
PEP
AT5G57100.1
Position on the Genome Chromosome Chr5
Start Position 23106563
End Position 23108440
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00682471
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Sugar phosphate transporter domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Nucleotide-sugar uncharacterized transporter 1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03151
Pfam Description Details
InterPro ID
IPR004853
InterPro Description Details
GO ID
GO:0015297,GO:0005338,GO:0016021,GO:0005794,GO:0005464,GO:0008643,GO:0022857
GO Description Details
GOslim ID
GO:0015931,GO:0006810,GO:0005215,GO:0006811,GO:0016020,GO:0005794,GO:0008643
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Nucleotide-sugar uncharacterized transporter 1
OrthoDB(1 item)
119497at33090
Sugar phosphate transporter domain
Pfam(1 item)
 
Triose-phosphate Transporter family
InterPro(1 item)
 
Sugar phosphate transporter domain
Gene ontology(7 items)
MF
antiporter activity
MF
nucleotide-sugar transmembrane transporter activity
CC
integral component of membrane
CC
Golgi apparatus
MF
UDP-xylose transmembrane transporter activity
BP
carbohydrate transport
MF
transmembrane transporter activity
GO slim(7 items)
BP
nucleobase-containing compound transport
MF
transporter activity
BP
ion transport
CC
Golgi apparatus
BP
carbohydrate transport

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.