Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G54390.1
PEP
AT5G54390.1
Position on the Genome Chromosome Chr5
Start Position 22086133
End Position 22087586
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00308776
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Inositol monophosphatase-like
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
PAP-specific phosphatase HAL2-like
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00459
Pfam Description Details
InterPro ID
IPR020550,IPR000760,IPR020583,IPR006239
InterPro Description Details
GO ID
GO:0046872,GO:0008441,GO:0000103,GO:0042578,GO:0046855,GO:0046854
GO Description Details
GOslim ID
GO:0006793,GO:0016787,GO:0006066,GO:0006790,GO:0043167,GO:0044255,GO:0005975
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G54390
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.