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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G51700.1
PEP
AT5G51700.1
Position on the Genome Chromosome Chr5
Start Position 21001373
End Position 21003143
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00582457
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
CHORD domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Cysteine and histidine-rich domain-containing protein RAR1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF04968
Pfam Description Details
InterPro ID
IPR043316,IPR007051
InterPro Description Details
GO ID
GO:0009816,GO:0051879,GO:0008270,GO:0005737,GO:0005634,GO:0009817,GO:0042742,GO:0002679,GO:0050821,GO:0050832,GO:0009626
GO Description Details
GOslim ID
GO:0050896,GO:0044419,GO:0005634,GO:0005515,GO:0002376,GO:0031647,GO:0005737,GO:0043167,GO:0008152
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G51700
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Cysteine and histidine-rich domain-containing protein RAR1
OrthoDB(1 item)
158471at33090
CHORD domain
Pfam(1 item)
InterPro(2 items)
Gene ontology(11 items)
BP
defense response to bacterium
MF
Hsp90 protein binding
MF
zinc ion binding
BP
defense response to fungus
BP
defense response to bacterium
BP
respiratory burst involved in defense response
BP
protein stabilization
BP
defense response to fungus
BP
plant-type hypersensitive response
GO slim(9 items)
BP
response to stimulus
BP
interspecies interaction between organisms
MF
protein binding
BP
immune system process
BP
regulation of protein stability
BP
metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.