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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G49500.1
PEP
AT5G49500.1
Position on the Genome Chromosome Chr5
Start Position 20077556
End Position 20080206
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI02030032
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Signal recognition particle, SRP54 subunit
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Signal recognition particle 54 kDa protein 2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF02881,PF02978,PF00448
Pfam Description Details
InterPro ID
IPR022941,IPR027417,IPR006325,IPR036891,IPR036225,IPR013822,IPR042101,IPR000897,IPR004125
InterPro Description Details
GO ID
GO:0005786,GO:0003924,GO:0008312,GO:0030942,GO:0005829,GO:0005525,GO:0006616
GO Description Details
GOslim ID
GO:0042277,GO:0001882,GO:0043167,GO:0048500,GO:0000166,GO:0015031,GO:0016787,GO:0003676,GO:0005737,GO:0005575,GO:0051641
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G49500
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.