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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G48070.1
PEP
AT5G48070.1
Position on the Genome Chromosome Chr5
Start Position 19482158
End Position 19483231
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00377188
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Xyloglucan endotransglucosylase/hydrolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Xyloglucan endotransglucosylase/hydrolase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF06955,PF00722
Pfam Description Details
InterPro ID
IPR013320,IPR016455,IPR000757,IPR008263,IPR008264,IPR010713
InterPro Description Details
GO ID
GO:0005618,GO:0042546,GO:0010411,GO:0004553,GO:0071555,GO:0048046,GO:0016762
GO Description Details
GOslim ID
GO:0071555,GO:0016740,GO:0005576,GO:0016787,GO:0005976,GO:0005618,GO:0044085
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Xyloglucan endotransglucosylase/hydrolase
OrthoDB(1 item)
145952at33090
Xyloglucan endotransglucosylase/hydrolase
Pfam(2 items)
 
Xyloglucan endo-transglycosylase (XET) C-terminus
 
Glycosyl hydrolases family 16
InterPro(6 items)
 
ConA-like_dom_sf
 
Glycoside hydrolase family 16
 
Beta_glucanase
 
Xyloglucan endo-transglycosylase, C-terminal
Gene ontology(7 items)
BP
cell wall biogenesis
BP
xyloglucan metabolic process
MF
hydrolase activity, hydrolyzing O-glycosyl compounds
BP
cell wall organization
MF
xyloglucan:xyloglucosyl transferase activity
GO slim(7 items)
BP
cell wall organization
MF
transferase activity
CC
extracellular region
MF
hydrolase activity
BP
polysaccharide metabolic process
BP
cellular component biogenesis

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.