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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G48030.1
PEP
AT5G48030.1
Position on the Genome Chromosome Chr5
Start Position 19466298
End Position 19469753
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00236991
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
DnaJ domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Chaperone protein dnaJ GFA2, mitochondrial
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00226,PF01556,PF00684
Pfam Description Details
InterPro ID
IPR008971,IPR012724,IPR001623,IPR002939,IPR036869,IPR018253,IPR001305,IPR036410
InterPro Description Details
GO ID
GO:0005737,GO:0051085,GO:0010198,GO:0051082,GO:0046872,GO:0009553,GO:0010197,GO:0042026,GO:0031072,GO:0009408,GO:0000740,GO:0005739,GO:0009558,GO:0005524
GO Description Details
GOslim ID
GO:0043167,GO:0048284,GO:0006457,GO:0032501,GO:0005737,GO:0050896,GO:0032502,GO:0000166,GO:0061024,GO:0000003,GO:0005515,GO:0005739,GO:0006997,GO:0051704
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G48030
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Chaperone protein dnaJ GFA2, mitochondrial
OrthoDB(1 item)
109518at33090
DnaJ domain
Pfam(3 items)
 
DnaJ domain
 
DnaJ C terminal domain
 
DnaJ central domain
InterPro(8 items)
 
HSP40/DnaJ_pept-bd
 
Chaperone DnaJ, C-terminal
 
DnaJ_domain_CS
 
Heat shock protein DnaJ, cysteine-rich domain
 
HSP_DnaJ_Cys-rich_dom_sf
Gene ontology(14 items)
BP
chaperone cofactor-dependent protein refolding
BP
synergid death
MF
unfolded protein binding
MF
metal ion binding
BP
embryo sac development
BP
polar nucleus fusion
BP
protein refolding
MF
heat shock protein binding
BP
response to heat
BP
nuclear membrane fusion
CC
mitochondrion
BP
embryo sac cellularization
GO slim(14 items)
BP
organelle fusion
BP
protein folding
BP
multicellular organismal process
BP
response to stimulus
BP
developmental process
MF
nucleotide binding
BP
membrane organization
MF
protein binding
CC
mitochondrion
BP
nucleus organization
BP
multi-organism process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.