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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G47670.1
PEP
AT5G47670.1
Position on the Genome Chromosome Chr5
Start Position 19315061
End Position 19315975
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00320564
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription factor CBF/NF-Y/archaeal histone domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Nuclear transcription factor Y subunit B-6
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00808
Pfam Description Details
InterPro ID
IPR003958,IPR003956,IPR009072
InterPro Description Details
GO ID
GO:0003700,GO:0046982,GO:0033613,GO:0043565,GO:0045893,GO:0005634,GO:0006355,GO:0009738
GO Description Details
GOslim ID
GO:0006351,GO:0005515,GO:0005634,GO:0050789,GO:0065009,GO:0003676,GO:0050896,GO:0007154
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
NF-YB family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G47670
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Nuclear transcription factor Y subunit B-6
OrthoDB(1 item)
157671at33090
Transcription factor CBF/NF-Y/archaeal histone domain
Pfam(1 item)
 
Histone-like transcription factor (CBF/NF-Y) and archaeal histone
InterPro(3 items)
 
Transcription factor CBF/NF-Y/archaeal histone domain
 
Transcrpt_fac_NFYB/HAP3_CS
Gene ontology(8 items)
MF
DNA-binding transcription factor activity
MF
protein heterodimerization activity
MF
activating transcription factor binding
MF
sequence-specific DNA binding
BP
positive regulation of transcription, DNA-templated
BP
regulation of transcription, DNA-templated
BP
abscisic acid-activated signaling pathway
GO slim(8 items)
BP
transcription, DNA-templated
MF
protein binding
BP
regulation of biological process
BP
regulation of molecular function
MF
nucleic acid binding
BP
response to stimulus
BP
cell communication

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.