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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G47390.1
PEP
AT5G47390.1
Position on the Genome Chromosome Chr5
Start Position 19227001
End Position 19228546
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00407881
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor KUA1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00249
Pfam Description Details
InterPro ID
IPR017930,IPR001005,IPR009057,IPR006447,IPR001878
InterPro Description Details
GO ID
GO:0030307,GO:0048366,GO:0009646,GO:0009723,GO:0009733,GO:0045892,GO:0010252,GO:0048527,GO:0090697,GO:0009739,GO:0000122,GO:0006355,GO:0008270,GO:0010150,GO:0009744,GO:2000469,GO:0003700,GO:0009737,GO:0000976,GO:0005634
GO Description Details
GOslim ID
GO:0050789,GO:0032502,GO:0032501,GO:0016491,GO:0065009,GO:0065008,GO:0050896,GO:0016043,GO:0003676,GO:0016049,GO:0006351,GO:0005634,GO:0016209,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
MYB_related family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor KUA1
OrthoDB(1 item)
147026at33090
Myb domain
Pfam(1 item)
 
Myb-like DNA-binding domain
InterPro(5 items)
 
SANT/Myb domain
 
Homeobox-like_sf
 
Myb_dom_plants
 
Zinc finger, CCHC-type
Gene ontology(20 items)
BP
positive regulation of cell growth
BP
leaf development
BP
response to absence of light
BP
response to ethylene
BP
response to auxin
BP
negative regulation of transcription, DNA-templated
BP
auxin homeostasis
BP
lateral root development
BP
post-embryonic plant organ morphogenesis
BP
response to gibberellin
BP
negative regulation of transcription by RNA polymerase II
BP
regulation of transcription, DNA-templated
MF
zinc ion binding
BP
leaf senescence
BP
response to sucrose
BP
negative regulation of peroxidase activity
MF
DNA-binding transcription factor activity
BP
response to abscisic acid
MF
transcription regulatory region sequence-specific DNA binding
GO slim(14 items)
BP
regulation of biological process
BP
developmental process
BP
multicellular organismal process
MF
oxidoreductase activity
BP
regulation of molecular function
BP
regulation of biological quality
BP
response to stimulus
BP
cellular component organization
MF
nucleic acid binding
BP
transcription, DNA-templated
MF
antioxidant activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.