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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G44870.1
PEP
AT5G44870.1
Position on the Genome Chromosome Chr5
Start Position 18114666
End Position 18118608
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00410066
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Toll/interleukin-1 receptor homology (TIR) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Disease resistance protein LAZ5
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00931,PF07725,PF01582
Pfam Description Details
InterPro ID
IPR032675,IPR000157,IPR035897,IPR002182,IPR027417,IPR011713
InterPro Description Details
GO ID
GO:0051607,GO:0009615,GO:0043531,GO:0061809,GO:0009626,GO:0005524,GO:0050135,GO:0007165
GO Description Details
GOslim ID
GO:0000166,GO:0050896,GO:0044419,GO:0002376,GO:0009975,GO:0043167,GO:0016787,GO:0050789,GO:0007154
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Disease resistance protein LAZ5
OrthoDB(1 item)
4081at33090
Toll/interleukin-1 receptor homology (TIR) domain
Pfam(3 items)
 
NB-ARC domain
 
Leucine Rich Repeat
 
TIR domain
InterPro(6 items)
 
Toll/interleukin-1 receptor homology (TIR) domain
 
Toll_tir_struct_dom_sf
 
P-loop_NTPase
 
Leucine-rich repeat 3
Gene ontology(8 items)
BP
defense response to virus
BP
response to virus
MF
NAD+ nucleotidase, cyclic ADP-ribose generating
BP
plant-type hypersensitive response
MF
NAD(P)+ nucleosidase activity
BP
signal transduction
GO slim(9 items)
MF
nucleotide binding
BP
response to stimulus
BP
interspecies interaction between organisms
BP
immune system process
MF
cyclase activity
MF
hydrolase activity
BP
regulation of biological process
BP
cell communication

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.