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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G44190.1
PEP
AT5G44190.1
Position on the Genome Chromosome Chr5
Start Position 17798435
End Position 17800647
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00293976
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription activator GLK2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00249
Pfam Description Details
InterPro ID
IPR017930,IPR001005,IPR009057,IPR006447
InterPro Description Details
GO ID
GO:1900056,GO:0010380,GO:0009910,GO:0005634,GO:0003700,GO:0045893,GO:0009658,GO:0000976
GO Description Details
GOslim ID
GO:0050789,GO:0003676,GO:0032501,GO:0065009,GO:0006351,GO:0046483,GO:0006725,GO:0006807,GO:0000003,GO:0042440,GO:0032502,GO:0005634,GO:0009657
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
G2-like family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription activator GLK2
OrthoDB(1 item)
143330at33090
Myb domain
Pfam(1 item)
 
Myb-like DNA-binding domain
InterPro(4 items)
 
SANT/Myb domain
 
Homeobox-like_sf
 
Myb_dom_plants
Gene ontology(8 items)
BP
negative regulation of leaf senescence
BP
regulation of chlorophyll biosynthetic process
BP
negative regulation of flower development
MF
DNA-binding transcription factor activity
BP
positive regulation of transcription, DNA-templated
BP
chloroplast organization
MF
transcription regulatory region sequence-specific DNA binding
GO slim(13 items)
BP
regulation of biological process
MF
nucleic acid binding
BP
multicellular organismal process
BP
regulation of molecular function
BP
transcription, DNA-templated
BP
heterocycle metabolic process
BP
cellular aromatic compound metabolic process
BP
nitrogen compound metabolic process
BP
pigment metabolic process
BP
developmental process
BP
plastid organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.