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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G42970.1
PEP
AT5G42970.1
Position on the Genome Chromosome Chr5
Start Position 17237470
End Position 17240649
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00248894
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Winged helix-like DNA-binding domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
COP9 signalosome complex subunit 4
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF01399
Pfam Description Details
InterPro ID
IPR037754,IPR000717,IPR040134,IPR036388,IPR036390
InterPro Description Details
GO ID
GO:0009585,GO:0000338,GO:0008180,GO:0007275,GO:0005829,GO:0010971
GO Description Details
GOslim ID
GO:0032991,GO:0006464,GO:0005634,GO:0051606,GO:0032501,GO:0007049,GO:0006508,GO:0050789,GO:0032502,GO:0005737,GO:0000280,GO:0007154
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G42970
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.