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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G39950.1
PEP
AT5G39950.1
Position on the Genome Chromosome Chr5
Start Position 15990885
End Position 15991881
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00404488
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Thioredoxin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Thioredoxin H2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00085
Pfam Description Details
InterPro ID
IPR013766,IPR017937,IPR005746,IPR036249
InterPro Description Details
GO ID
GO:0005739,GO:0005886,GO:0045454,GO:0006662,GO:0016671,GO:0015035,GO:0005829
GO Description Details
GOslim ID
GO:0005737,GO:0016491,GO:0016020,GO:0005739,GO:0065008,GO:0006662,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G39950
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Thioredoxin H2
OrthoDB(1 item)
228196at33090
Thioredoxin
Pfam(1 item)
 
Thioredoxin
InterPro(4 items)
 
Thioredoxin domain
 
Thioredoxin_CS
 
Thioredoxin-like_sf
Gene ontology(7 items)
CC
mitochondrion
CC
plasma membrane
BP
cell redox homeostasis
BP
glycerol ether metabolic process
MF
oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
MF
protein disulfide oxidoreductase activity
GO slim(7 items)
MF
oxidoreductase activity
CC
mitochondrion
BP
regulation of biological quality
BP
glycerol ether metabolic process
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.