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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G39020.1
PEP
AT5G39020.1
Position on the Genome Chromosome Chr5
Start Position 15616917
End Position 15619358
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00585846
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protein kinase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable receptor-like protein kinase At5g39020
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00069,PF12819
Pfam Description Details
InterPro ID
IPR008271,IPR000719,IPR024788,IPR017441,IPR011009
InterPro Description Details
GO ID
GO:0016021,GO:0010038,GO:0004674,GO:0005524
GO Description Details
GOslim ID
GO:0000166,GO:0006793,GO:0043167,GO:0016020,GO:0050896,GO:0016740,GO:0006464
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Probable receptor-like protein kinase At5g39020
OrthoDB(1 item)
100579at33090
Protein kinase domain
Pfam(2 items)
 
Protein kinase domain
 
Carbohydrate-binding protein of the ER
InterPro(5 items)
 
Ser/Thr_kinase_AS
 
Protein kinase domain
 
Malectin-like carbohydrate-binding domain
 
Protein_kinase_ATP_BS
 
Kinase-like_dom_sf
Gene ontology(4 items)
CC
integral component of membrane
BP
response to metal ion
MF
protein serine/threonine kinase activity
GO slim(7 items)
MF
nucleotide binding
BP
phosphorus metabolic process
BP
response to stimulus
MF
transferase activity
BP
cellular protein modification process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.