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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G38840.1
PEP
AT5G38840.1
Position on the Genome Chromosome Chr5
Start Position 15551329
End Position 15554846
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00694971
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Forkhead-associated (FHA) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Kanadaptin-like protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00498
Pfam Description Details
InterPro ID
IPR008984,IPR000253
InterPro Description Details
GO ID
GO:0003729
GO Description Details
GOslim ID
GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Kanadaptin-like protein
OrthoDB(1 item)
58052at33090
Forkhead-associated (FHA) domain
Pfam(1 item)
 
FHA domain
InterPro(2 items)
 
SMAD_FHA_dom_sf
 
Forkhead-associated (FHA) domain
Gene ontology(1 item)
GO slim(1 item)
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.