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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G25930.1
PEP
AT5G25930.1
Position on the Genome Chromosome Chr5
Start Position 9050880
End Position 9053978
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00211956
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Leucine-rich repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Kinase family with leucine-rich repeat domain-containing protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF13855,PF08263,PF00069
Pfam Description Details
InterPro ID
IPR013210,IPR001611,IPR000719,IPR003591,IPR011009,IPR032675,IPR017441,IPR008271
InterPro Description Details
GO ID
GO:0004672,GO:0005886,GO:0005524,GO:0016021
GO Description Details
GOslim ID
GO:0016020,GO:0016740,GO:0000166,GO:0006793,GO:0006464,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G25930
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Kinase family with leucine-rich repeat domain-containing protein
OrthoDB(1 item)
15123at33090
Leucine-rich repeat
Pfam(3 items)
 
Leucine rich repeat
 
Leucine rich repeat N-terminal domain
 
Protein kinase domain
InterPro(8 items)
 
Leucine-rich repeat-containing N-terminal, plant-type
 
Leucine-rich repeat
 
Protein kinase domain
 
Leu-rich_rpt_typical-subtyp
 
Kinase-like_dom_sf
 
Protein_kinase_ATP_BS
 
Ser/Thr_kinase_AS
Gene ontology(4 items)
MF
protein kinase activity
CC
plasma membrane
CC
integral component of membrane
GO slim(6 items)
MF
transferase activity
MF
nucleotide binding
BP
phosphorus metabolic process
BP
cellular protein modification process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.