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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G25757.1
PEP
AT5G25757.1
Position on the Genome Chromosome Chr5
Start Position 8965515
End Position 8967460
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00053124
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Eukaryotic translation initiation factor 3 subunit L
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Eukaryotic translation initiation factor 3 subunit L
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF10255
Pfam Description Details
InterPro ID
IPR000717,IPR019382
InterPro Description Details
GO ID
GO:0001732,GO:0016282,GO:0005852,GO:0033290,GO:0003743
GO Description Details
GOslim ID
GO:0005737,GO:0003676,GO:0045182,GO:0065003,GO:0032991,GO:0015935
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Eukaryotic translation initiation factor 3 subunit L
OrthoDB(1 item)
43820at33090
Eukaryotic translation initiation factor 3 subunit L
Pfam(1 item)
 
RNA polymerase I-associated factor PAF67
InterPro(2 items)
 
Proteasome component (PCI) domain
 
Translation initiation factor 3 complex subunit L
Gene ontology(5 items)
BP
formation of cytoplasmic translation initiation complex
CC
eukaryotic 43S preinitiation complex
CC
eukaryotic translation initiation factor 3 complex
CC
eukaryotic 48S preinitiation complex
MF
translation initiation factor activity
GO slim(6 items)
MF
nucleic acid binding
MF
translation regulator activity
BP
protein-containing complex assembly
CC
protein-containing complex
CC
small ribosomal subunit

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.