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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G24740.6
PEP
AT5G24740.6
Position on the Genome Chromosome Chr5
Start Position 8470073
End Position 8487938
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00965595
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Vacuolar protein sorting-associated protein 13, N-terminal domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Vacuolar protein sorting-associated protein, putative (DUF1162)
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF06650,PF16908,PF12624,PF16909,PF16910
Pfam Description Details
InterPro ID
IPR009543,IPR031642,IPR026854,IPR031645,IPR031646,IPR026847
InterPro Description Details
GO ID
GO:0019898,GO:0045053,GO:0006623
GO Description Details
GOslim ID
GO:0051641,GO:0005575,GO:0065008,GO:0016020,GO:0015031
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.