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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G24520.4
PEP
AT5G24520.4
Position on the Genome Chromosome Chr5
Start Position 8371708
End Position 8372733
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00026379
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WD40 repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein TRANSPARENT TESTA GLABRA 1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00400
Pfam Description Details
InterPro ID
IPR015943,IPR036322,IPR019775,IPR001680,IPR017986
InterPro Description Details
GO ID
GO:0009723,GO:0010026,GO:0045165,GO:0032880,GO:0007275,GO:0009733,GO:0005634,GO:0003677,GO:0005737,GO:0009957
GO Description Details
GOslim ID
GO:0032502,GO:0050896,GO:0050789,GO:0051179,GO:0005737,GO:0003676,GO:0005634,GO:0032501
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G24520
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.