Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G23870.3
PEP
AT5G23870.3
Position on the Genome Chromosome Chr5
Start Position 8046060
End Position 8049999
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01204571
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Pectin acetylesterase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Pectin acetylesterase 9
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF03283
Pfam Description Details
InterPro ID
IPR004963
InterPro Description Details
GO ID
GO:0052793,GO:0071555,GO:0005576,GO:0009505,GO:0052689
GO Description Details
GOslim ID
GO:0005576,GO:0016787,GO:0005618,GO:0071555
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G23870
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Pectin acetylesterase 9
OrthoDB(1 item)
104667at33090
Pectin acetylesterase
Pfam(1 item)
 
Pectinacetylesterase
InterPro(1 item)
 
Pectinacetylesterase/NOTUM
Gene ontology(5 items)
MF
pectin acetylesterase activity
BP
cell wall organization
CC
extracellular region
CC
plant-type cell wall
MF
carboxylic ester hydrolase activity
GO slim(4 items)
CC
extracellular region
MF
hydrolase activity
BP
cell wall organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.