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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G23580.1
PEP
AT5G23580.1
Position on the Genome Chromosome Chr5
Start Position 7950388
End Position 7952433
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00156150
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
EF-hand domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
CPK12
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF13499,PF00069
Pfam Description Details
InterPro ID
IPR002048,IPR011992,IPR018247,IPR008271,IPR017441,IPR000719,IPR011009
InterPro Description Details
GO ID
GO:0005524,GO:0004674,GO:0005509
GO Description Details
GOslim ID
GO:0043167,GO:0006464,GO:0000166,GO:0006793,GO:0016740
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
49587at33090
EF-hand domain
Pfam(2 items)
 
EF-hand domain pair
 
Protein kinase domain
InterPro(7 items)
 
EF-hand domain
 
EF-hand-dom_pair
 
EF_Hand_1_Ca_BS
 
Ser/Thr_kinase_AS
 
Protein_kinase_ATP_BS
 
Protein kinase domain
 
Kinase-like_dom_sf
Gene ontology(3 items)
MF
protein serine/threonine kinase activity
MF
calcium ion binding
GO slim(5 items)
BP
cellular protein modification process
MF
nucleotide binding
BP
phosphorus metabolic process
MF
transferase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.